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Chapter Notes - Recent Innovations in Biotechnology

Introduction

  • Biotechnological innovations have significantly advanced over the past decade, impacting agriculture, medical science, environment, and energy sectors.
  • Key innovations include genetically modified (GM) crops, advanced diagnostics, oil-eating bacteria, lab-grown human organs for transplants, and biofuels to reduce carbon footprints.
  • These innovations enhance cost-effectiveness and resource efficiency, particularly in sustainable biogas energy technology.
  • Synthetic biology enables lab-grown plants and meat, genetically tailored for specific taste and appearance.

Environmental Biotechnology

  • Since the Industrial Revolution in the 1750s, industrial growth has led to environmental degradation, polluting air, water, and soil with heavy metals, pesticides, dyes, carbon dioxide, greenhouse gases, and micro-pollutants.
  • Biotechnology provides eco-friendly solutions using natural or genetically engineered biological systems to address environmental issues.
  • Key approaches include bioremediation (waste treatment, degradation, vermi-technology), prevention of environmental problems, detection and monitoring of contaminants, and genetic engineering.
  • The focus here is on prevention, specifically through biofuel production, biodegradation, and the manufacture of biodegradable products.

Biofuel

  • Biofuels are fuels derived from biological products, including living organisms or biological waste like landfill waste or recycled vegetable oil.
  • Specific crops such as soybeans, jatropha, pongamia, palm oil, and algae are cultivated for biofuel production, known as biofuels or agrofuels.
  • Biofuels are categorized into biodiesel, bioalcohol, biogas, and biomass based on their characteristics.
  • Biodiesel: Produced from animal fats, vegetable oils, waste cooking oil, soybean, rapeseed, jatropha, mustard, flax, sunflower, palm oil, canola, hemp, field pennycress, Pongamia pinnata, or algae via trans-esterification.
  • Biodiesel can be used pure or blended (e.g., 5% blend in Europe) and is compatible with regular diesel engines without modifications.
  • Biodiesel contains higher hydrogen and oxygen and less carbon than fossil fuels, improving combustion and reducing particulate emissions from unburnt carbon.
  • Bioalcohol: Includes bioethanol, produced from wheat, corn, sugarcane, molasses, sugar beets, potatoes, or fruit waste through fermentation.
  • Bioalcohol production involves releasing sugars from starch or cellulose, followed by microbial fermentation, distillation, and drying.
  • Ethanol blending in petrol varies globally (2% to 30%), with India permitting up to 10% ethanol blending, aiming for 5% nationwide as per Bureau of Indian Standards.
  • Ethanol reduces fossil fuel use and greenhouse gas emissions but faces challenges like reduced engine efficiency, difficulty starting engines, sputtering, aluminium oxidation in carburetors, and steel rusting, requiring engine modifications.
  • Algae (micro and macro) are explored for biofuel due to ease of cultivation, renewability, and ability to produce both bioalcohol and biodiesel without competing with food crops.
  • Algae-based biofuel production is not yet cost-effective, and research continues to address this challenge.
  • Biogas: Produced from organic materials like dung, night soil, manure, crops, organic industrial waste, and wastewater, primarily consisting of methane and carbon dioxide.
  • Biogas is generated through anaerobic digestion by bacteria in an anaerobic digester, optimized for microbial growth to enhance breakdown efficiency.
  • Biogas supports waste removal, environmental management, and energy production, with its use expected to double in the next five years.
  • In India, the National Biogas and Manure Management Programme has installed approximately 49.3 lakh biogas plants, incorporating technologies like cryogenic separation, in situ upgrading, hydrate separation, and biological methods.
  • Biogas plants provide sustainable cooking gas and organic bio-manure for households, reducing indoor air pollution and LPG costs.
  • Challenges include imperfect production methods and vehicle engine corrosion when used as a biofuel, increasing maintenance costs.
  • Biomass: Solid biofuels like wood, sawdust, coal, grass cuttings, domestic refuse, charcoal, agricultural waste, non-food energy crops, and dried manure are used directly in stoves, furnaces, or hearths.
  • Biomass such as sawdust and wood chips is often converted into pellets, and cow dung cakes are a popular solid biofuel.
  • Biomass combustion emits pollutants like particulate matter and polycyclic aromatic hydrocarbons (PAHs), posing health risks.

Biodegradation

  • Biodegradation is nature’s waste management system, breaking down materials like yard waste and crude oil to maintain a clean environment.
  • Population growth has increased non-biodegradable waste, such as plastics and fluorinated carbons, which take centuries to decompose.
  • Microbes, including bacteria that degrade plastics, have been identified and enhanced to accelerate decomposition, though this technology is still developing.
  • Bioplastics: Biodegradable materials made from plant sources like leaves, bamboo, wood chips, corn starch, seaweeds, and natural biopolymers (polysaccharides, proteins, lignin, natural rubber) are alternatives to plastics and styrofoam.
  • Bioplastics reduce reliance on fossil fuel-based plastics, which consume less than 10% of oil but have significant environmental impacts.
  • In 1999, biopolymer production from genetically modified plant seeds and leaves became economically competitive with petrochemical polymers.
  • Polyhydroxybutyrate (PHB), a biodegradable plastic, is commercially produced via fermentation with Alcaligenes eutropus and in transgenic plants like Arabidopsis, where PHB globules form in chloroplasts without affecting plant growth.
  • Large-scale PHB production using plants like populus is limited by high costs compared to synthetic polymers.
  • Biotechnology in Paper Industry: Pulp making involves cooking wood chips with caustic soda and sulfur to separate lignin from cellulose, a process improved by biopulping.
  • Biopulping uses lignin-degrading fungi to enhance pulp making, reducing energy and chemical use, improving paper quality, and minimizing environmental impact.
  • Biobleaching employs enzymes like xylanase to reduce chlorine use in bleaching, further lowering environmental impact.
  • Genetically modified trees with reduced lignin content are being developed to simplify pulp making.
  • Non-wood materials like bagasse, bamboo, jute, hemp, esparto, flax, grass, kenaf, or reed are increasingly used in paper production to reduce deforestation, with biotechnology enhancing their processing.
  • Biotechnology in Oil Recovery: Microbial technologies enhance Enhanced Oil Recovery (EOR) by extracting residual oil after primary and secondary production phases.
  • Bacteria that feed on hydrocarbons are used to clean oil spills, with genetically engineered Pseudomonas “superbugs” developed for this purpose.

Bioremediation

  • Bioremediation uses microorganisms to reduce toxicity from chemical pollutants, including heavy metals (As, Cr, Hg, Cd, Zn) in soil or water.
  • Key principles for bioremediation include the pollutant’s potential for biological transformation to less toxic products, bioavailability to microorganisms, and efficiency of bioactivity.
  • Advances in molecular genetics and enzyme-tailoring through recombinant DNA-RNA technologies facilitate the removal of heavy metals and toxic chemicals from contaminated sites.

Plant Biotechnology

  • Plant biotechnology, including GM technology and molecular-assisted breeding, has developed products that enhance crop yields sustainably.
  • Applications include pharmaceuticals, recombinant therapeutic proteins, plant-made pharmaceuticals, transgenic plants, artificial seeds, plant-made vaccines, and antibodies (plantibodies).
  • Genome editing with CRISPR-Cas9 is being explored for crop improvement.

Innovations in Plant Biotechnology Through Gm Crops

  • GM crops are adopted in 29 countries, with soybeans, maize, cotton, and canola being the major crops.
  • Initial transgenic technology focused on weed and pest control, while second-generation GM crops address abiotic stress tolerance, improved nutrition, sexual incompatibilities, and gene introduction from unrelated organisms (bacteria, fungi, plants, viruses).
  • Herbicide Tolerant GM Crops: Weeds like Striga reduce crop yields by competing for light, water, and nutrients.
  • Non-selective herbicides like glyphosate harm crops, but biotechnology enables over-production of herbicide target enzymes in crop chloroplasts, making crops insensitive to herbicides.
  • A modified Agrobacterium gene encoding a glyphosate-resistant enzyme has been introduced into crops like canola, soybean, corn, and cotton, commercialized as Roundup Ready GM crops.
  • Disease Resistant GM Crops: Crops face losses from viruses, fungi, bacteria, insects, mites, and nematodes.
  • Viruses: Transgenic technology introduces viral coat protein genes to confer resistance, acting like a vaccine, against viruses like yellow crookneck disease in squash, potato mosaic virus, potato leaf roll virus, barley yellow dwarf virus, and papaya ringspot virus.
  • Fungi: Fungal diseases cause wilting, mold, rusts, blotches, scabs, and rot, necessitating alternatives to fungicides like methyl bromide.
  • Defensins, antimicrobial proteins from insects, mammals, crustaceans, fish, and plants, show antifungal activity; alfalfa defensin in transgenic potatoes resists Verticillium dahlia.
  • Resveratrol from white grapevine protects against Botrytis cinerea in wheat and barley; Rpi-vnt1.1 from Solanum venturi resists late blight in potatoes; wheat oxalate oxidase resists chestnut blight; and insect chitinase resists apple scab.
  • Bacteria: Bacterial infections cause lesions, soft rots, yellowing, wilting, stunting, tumors, scabs, or blights, reducing yields.
  • Lysozyme genes in potatoes resist blackleg and soft rot (Erwinia carotovora), and genes from E. carotovora and Pseudomonas syringae resist wildfire disease in rice.
  • Insects: Bt crops express Bacillus thuringiensis (Bt) insecticidal Cry proteins, which bind to insect gut receptors, killing pests.
  • Bt cotton is commercially cultivated in India since 2002, and Bt brinjal was approved in Bangladesh in 2014.
  • Pyramiding (stacking multiple genes) addresses pests like fall-army worm; stacked Bt and drought-tolerance genes (B. subtilis cspB) produce hybrid maize.
  • Plant Nematodes: Transgenic strategies target nematodes in bananas, soybeans, rice, and potatoes, with potato genes achieving up to 70% resistance.
  • Genetic markers enable breeding of resistant wild strains with domesticated varieties, as seen in soybean resistance.
  • Stress Resistant GM Crops: Arabidopsis and tobacco with mannitol withstand high salinity and show enhanced germination and biomass.
  • Rice with barley embryogenesis abundant protein gene tolerates drought and salinity.
  • Soybeans and wheat with sunflower HaHB4 gene (EcoSoy and EcoWheat) are drought-tolerant and herbicide-resistant, with wheat yielding up to 20% more.
  • GM maize CIEA-9 in Mexico uses antisense RNA to silence trehalose expression, requiring 20% less water and withstanding higher temperatures.
  • GM Crops for Enhanced Paper Quality: Arabidopsis with coenzyme A-ligase has 45% less lignin; eucalyptus with an Arabidopsis thaliana protein gene produces 20% more wood and matures faster (5.5 vs. 7 years).
  • GM Crops for Improved Product: Potatoes with starch synthesis gene have 60% more starch, reducing fat uptake during frying.
  • Maize and soybean with stacked genes tolerate glyphosate and 2,4-D-choline herbicides.
  • Arctic Gala apples with non-browning genes resist browning.
  • Biofortified GM Crops: Golden Rice with phytoene synthase, carotene desaturase, and lycopene beta-cyclase genes synthesizes beta-carotene, a vitamin A source.
  • Soybeans with downregulated fatty acid desaturase have higher oleic acid content.
  • Tomatoes with antisense polygalacturonase have increased shelf life.

Genome Engineering Technology: Application of Crispr-Cas9

  • CRISPR-Cas9 uses guide RNA and Cas9 to edit genes in plants, developed at the University of California San Diego for drought and disease-resistant crops.
  • It bypasses Mendelian genetics by transferring specific traits from one parent to offspring, improving nutritional quality, yield, and resistance to biotic and abiotic stresses in crops like rice, tomato, and soybean.
  • CRISPR-Cas9 is faster, simpler, and more precise than traditional genetic manipulation, targeting multiple genes for beneficial traits.
  • Challenges include off-target effects, low efficiency, regulatory issues, and safety concerns, with ongoing efforts to improve on-target efficiency and modify Cas9.

Regenerative Medicine

  • Regenerative medicine is a multidisciplinary field aiming to replace cells and organs to restore function lost due to degeneration, trauma, or disease, and protect vulnerable cells from death.
  • Organ transplantation includes autografts (same individual), allografts (same species, non-identical), and xenografts (different species, e.g., pig valves in human hearts).
  • Organs like liver, kidney, and pancreas have limited regeneration capacity, making stem cell technology vital for replacing damaged cells.

Stem Cell Technology

  • Stem cells self-assemble into complex structures, forming organized cell clusters in hydrogels like Matrigel with suitable exogenous factors.
  • Stem cell-derived organoids are 3D self-organized tissue models serving as tissue and organ substitutes.
  • Organoids, ultra-small 3D tissue cultures, are derived from pluripotent stem cells (PSCs) and adult stem cells (ASCs) by mimicking tissue development and homeostasis.
  • Organoids replicate organ complexity or express specific cell subsets, e.g., mesenchymal stem cell shape influences differentiation into osteoblasts (wide spreading) or adipocytes (round shape).
  • Organoids model spatial organization, cell-matrix, and cell-cell interactions, and physiological functions of tissue-specific cells.
  • They bridge in vitro and in vivo systems, enabling manipulation to mimic in vivo physiology for long-term cultures and signaling maintenance.
  • Engineering organoids aims to improve in vivo tissue mimics, achieve high-throughput formats, and support multi-tissue organoid systems like human-on-a-chip.
  • Bioengineering enhances understanding of cell behavior and organization in organoid formation.
  • Monolayer cell cultures provide uniform nutrient access, unlike in vivo tissues where cell position affects nutrient availability.
  • 3D cell culture systems better predict in vivo drug responses compared to monolayer cultures.
  • Tumor spheres model cancer stem cell expansion, while organoids exhibit ordered self-assembly dependent on a matrix, unlike spheroids.
  • Organoids are superior in vitro models for organ development, disease modeling, drug penetration, screening, and toxicity testing compared to 2D or 3D co-cultures.
  • Spheroid formation methods include suspension culture, non-adherent surfaces, hanging drops, and microfluidics.
  • 3D cultures are more realistic but expensive, time-consuming, and require expert handling and careful planning due to limited automation and reproducibility.
  • Advancements include cell-based therapy, polymer and material science, nanotechnology, bioengineering, and 3D bioprinting for artificial organs.
  • Clinical trials include tissue-engineered vascular grafts, trachea, and cardiac patches.
  • Bioprinting: Uses CT or MRI to determine diseased organ dimensions, creating tissue-engineered scaffolds with biopolymers, cells, and growth factor-loaded nanoparticles via 3D bioprinting.
  • Carticel therapy expands autologous chondrocytes in vitro for cartilage injury repair.
  • laViv uses autologous fibroblasts for cosmetic facial wrinkle removal.
  • Dermagraft, an allogenic fibroblast dermal substitute, treats diabetic ulcers.
  • Autologous platelets from peripheral blood aid wound healing.

Nanobiotechnology

  • Nanoscience studies materials at the nanoscale (less than one micron, 10^-9 to 10^-12 meters), while nanotechnology applies these materials.
  • Nanobiotechnology applies nanotechnology in biotechnology, with nanomedicine focusing on diagnosis and therapy.
  • Converting bulk materials to nanoscale alters their physicochemical, biological, mechanical, optical, and electronic properties for diverse applications.
  • Gold nanoparticles change color based on size (ruby red <30 nm, pink up to 100 nm, darker for larger sizes) and increase surface area and reactivity exponentially.
  • Nanoparticles are made from inorganic (metal: iron oxide, gold, silver, copper, zinc oxide, titanium oxide, cadmium, selenium; non-metal: silicon oxide, calcium phosphate, ceramic) and organic (natural polymers: chitosan, alginate, cellulose, lignin; synthetic polymers: PCL, PLA, PLGA; proteins: albumin, gelatin; lipids: cholesterol, fatty acids, phospholipids, liposomes) materials.
  • Cadmium-selenium (CdSe) nanocrystals, or quantum dots (QDs), fluoresce in different colors based on size, used in fluorescence-based diagnostics.

Application of Nanotechnology

  • Nanotechnology is an enabling technology for chemicals, textiles, consumer products, cosmetics, health (nanomedicine), energy, agriculture, industries, and the environment.
  • Medicine (Nanomedicine): Nanoparticles or nanocarriers deliver drugs or biomolecules to diseased sites, enhancing bioavailability.
  • The enhanced permeability and retention (EPR) effect allows small nanocarriers (20-30 nm) to accumulate in tumors through leaky endothelial gaps, as seen with paclitaxel-loaded albumin nanoparticles and liposomal doxorubicin for cancer therapy.
  • Silver nanoparticles with antimicrobial properties are used in wound dressings.
  • Cosmetics: Zinc oxide and titanium oxide nanoparticles protect against UV light in sunscreens; liposomal and nanoemulsion preparations enhance penetration of essential oils, vitamins, and biomolecules to prevent aging, reduce pigmentation, and provide other benefits.
  • Agriculture and Food Packaging: Nanotechnology enables precision farming, enhancing nutrient absorption, and nano-pesticides reduce pesticide use while controlling plant diseases.
  • Nanomaterials in food packaging extend preservation and storage; silver and iron nanoparticles disinfect livestock and poultry.
  • Textile: Nanomaterials improve textiles with stain and water repellence, wrinkle-free features, fire retardancy, high tensile strength, durability, and textured surfaces.
  • Nanotechnology imparts electrical conductivity to fibers, maintaining comfort and flexibility, and enables garments to sense external stimuli, regulate temperature, and potentially monitor health.
  • Nanobiosensors: Nanotechnology revolutionizes sensor development for detecting biomarkers, enabling low-cost, sensitive point-of-care devices for bedside or rural testing with small sample volumes.
  • The “Lab on a Chip” concept uses nanotechnology and microfluidics for simultaneous multi-test diagnostics.
  • Nanotechnology offers immense potential for molecular imaging, drug delivery, gene therapy, biosensors, and biomarkers, but requires new regulations to address safety concerns in the body and environment.

Synthetic Biology

  • Traditional biology uses a reductionist approach, studying organisms from whole to molecular levels (anatomy, histology, molecular biology, biochemistry).
  • This approach has generated vast data, integrated through bioinformatics and systems biology into databases and computer models of tissues and metabolic pathways.
  • In 2004, MIT introduced synthetic biology, an engineering approach to build organisms from scratch, chemically synthesizing chromosomes, mitochondria, nuclei, cells, tissues, or entire organisms.
  • Synthetic biology designs biological components for specific functions, applying engineering principles to construct biomolecular networks, components, and pathways to reprogram organisms.
  • It bridges biology and engineering, addressing cellular complexity to innovate biomolecular networks and pathways.
  • Applications include biomanufacturing high-value biomolecules, diagnostics, therapeutics, cheaper drugs, eco-friendly fuels, and targeted therapies for superbugs and diseases like cancer.
  • Long DNA synthesis allows editing plasmids in silico, saving sequences as text files (ATGC), and synthesizing recombinant vectors rapidly, as demonstrated by a fully functional yeast chromosome at Johns Hopkins University.
  • Synthetic biology poses risks, such as creating new viruses or bioweapons, necessitating ethical practices and strict regulations.

Future Prospects

  • Biotechnological innovations will drive future societal benefits, leveraging microbes, complex ecological systems, and biological knowledge in medicine, healthcare, food systems, industries, and smart materials.
  • Microbial factories are being developed to synthesize chemicals, reducing pollution from chemical factories.
  • Microbes are designed to degrade harmful chemicals into eco-friendly products for pollution cleanup.
  • Synthesizing natural plant products in bacteria preserves plants from destruction.
  • Bioremediation technologies for contaminated soils and groundwater include solid-phase biotreatment, slurry-phase treatment, in situ treatment, and combined biological, physical, and chemical treatments.
  • Plant biotechnology, through GM technology and molecular-assisted breeding, enhances agricultural yields sustainably.
  • Plant-made pharmaceuticals, or molecular pharming, offer cost-effective, needle-free solutions for tropical diseases in low-income countries.
  • Non-food crops with sustainable management improve biomass feedstocks and biofuel, chemical, and biomaterial conversion processes.
  • Medical biotechnology advances include regenerative medicine, tissue engineering, transplantation, stem cell research, nanobiotechnology, and synthetic biology.
  • Nanobiotechnology brings nanoscale devices closer to reality, though safety concerns remain undefined.
  • Synthetic biology could produce rubber, bioacrylic, surfactants, additives, and flavors in bacteria, transforming industries.
  • India is a key player in the global vaccine market (DPT, BCG, measles) and developed low-cost diagnostics, interventions, and COVID-19 vaccines.
  • The Draft National Biotech Development Strategy 2020-24 aims to foster a vibrant startup, entrepreneurial, and industrial ecosystem, connecting academia and industry to strengthen research and innovation.
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FAQs on Recent Innovations in Biotechnology Chapter Notes - Biotechnology for Class 12 - NEET

1. What is environmental biotechnology and how does it contribute to sustainability?
Ans. Environmental biotechnology involves the use of biological processes for the treatment and remediation of contaminated environments. It contributes to sustainability by developing methods to clean up pollutants, manage waste, and improve agricultural practices, ultimately promoting a cleaner and healthier ecosystem.
2. How has plant biotechnology advanced agricultural practices?
Ans. Plant biotechnology has advanced agricultural practices through genetic engineering, which allows for the development of crops that are resistant to pests, diseases, and environmental stresses. This innovation leads to higher yields, reduced reliance on chemical pesticides, and improved food security.
3. What role does regenerative medicine play in healthcare?
Ans. Regenerative medicine aims to repair or replace damaged tissues and organs using techniques such as stem cell therapy and tissue engineering. This field holds the potential to treat previously incurable conditions, enhance recovery from injuries, and improve the quality of life for patients.
4. What are the applications of nanobiotechnology in medicine?
Ans. Nanobiotechnology has various applications in medicine, including targeted drug delivery, imaging, and diagnostics. By utilizing nanoscale materials, it enhances the effectiveness of therapies and reduces side effects, leading to more efficient and safer treatment options for patients.
5. How is synthetic biology shaping the future of biotechnology?
Ans. Synthetic biology is revolutionizing biotechnology by allowing scientists to design and construct new biological parts, devices, and systems. This interdisciplinary field enables the creation of innovative solutions for energy production, waste management, and disease treatment, paving the way for a sustainable future.
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