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Which of the following methods can be used to determine the molecular weight of a given polypeptide.
  • a)
    Gel filtration chromatography  
  • b)
    SDS-PAGE
  • c)
    MALDI-TOF mass spectroscopy
  • d)
    ChIP assay
Correct answer is option 'A,B,C'. Can you explain this answer?
Verified Answer
Which of the following methods can be used to determine the molecular ...
Gel filtration chromatography, SDS-PAGE, MALDI-TOF mass spectroscopy all three used in the molecular weight determination while ChIP assay is used for DNA protein interaction.
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Which of the following methods can be used to determine the molecular ...
Determining the molecular weight of a polypeptide is an important step in characterizing its structure and function. There are several methods that can be used to determine the molecular weight of a given polypeptide. The correct answer choices are a) Gel filtration chromatography, b) SDS-PAGE, and c) MALDI-TOF mass spectroscopy. Let's discuss each of these methods in detail:

a) Gel Filtration Chromatography:
Gel filtration chromatography, also known as size exclusion chromatography, is a technique that separates molecules based on their size. In this method, a sample containing the polypeptide of interest is loaded onto a column packed with porous beads. The larger molecules, including proteins and polypeptides, are excluded from entering the pores and elute out of the column first, while smaller molecules enter the pores and elute later. By comparing the elution volume of the polypeptide of interest to the elution volumes of protein standards of known molecular weights, the molecular weight of the polypeptide can be estimated.

b) SDS-PAGE:
SDS-PAGE (Sodium Dodecyl Sulfate Polyacrylamide Gel Electrophoresis) is a widely used method for separating proteins and polypeptides based on their molecular weight. In this technique, the polypeptide sample is treated with SDS, a detergent that denatures the proteins and coats them with a negative charge. The negatively charged polypeptides are then subjected to electrophoresis on a polyacrylamide gel. During electrophoresis, the polypeptides migrate through the gel based on their size, with smaller molecules moving faster and larger molecules moving slower. By comparing the migration distance of the polypeptide of interest to the migration distances of protein standards with known molecular weights, the molecular weight of the polypeptide can be determined.

c) MALDI-TOF Mass Spectroscopy:
MALDI-TOF (Matrix-Assisted Laser Desorption/Ionization Time-of-Flight) mass spectrometry is a powerful technique used to determine the molecular weight of proteins and polypeptides. In this method, the sample is mixed with a matrix compound and spotted onto a metal plate. The matrix absorbs the laser energy and transfers it to the sample, causing the polypeptides to ionize and desorb into the gas phase. The ions are then accelerated through a flight tube and detected based on their time of flight to the detector. By measuring the time of flight, the mass-to-charge ratio (m/z) of the ions can be determined, from which the molecular weight of the polypeptide can be calculated.

In summary, gel filtration chromatography, SDS-PAGE, and MALDI-TOF mass spectroscopy are all useful methods for determining the molecular weight of a given polypeptide. Each method has its advantages and limitations, and the choice of method depends on factors such as the size range of the polypeptide, the purity of the sample, and the availability of equipment and expertise.
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Explanation:The separation techniques of proteins are used to isolate and purify proteins from complex mixtures. These techniques are based on various properties of proteins such as solubility, charge, size, and others. However, the technique of protein separation based on viscosity is not commonly used. Protein solubility:Protein solubility refers to the ability of a protein to dissolve in a given solvent. Different proteins have different solubilities in different solvents. This property is often used in techniques like precipitation, where proteins are selectively precipitated out of solution based on their solubility.Protein charge:Protein charge refers to the net charge of a protein molecule, which is determined by the presence of charged amino acid residues such as lysine, arginine, aspartic acid, and glutamic acid. Techniques like electrophoresis and ion exchange chromatography utilize the charge differences between proteins to separate them.Protein size:Protein size refers to the molecular weight or size of a protein molecule. Techniques such as gel filtration chromatography and SDS-PAGE separate proteins based on their size. In gel filtration chromatography, proteins are separated based on their ability to enter and pass through a porous gel matrix, while in SDS-PAGE, proteins are separated based on their migration through a gel under the influence of an electric field.Protein viscosity:Protein viscosity refers to the resistance of a protein solution to flow. While protein viscosity can vary depending on factors such as protein concentration, temperature, and pH, it is not typically used as a property for protein separation. In conclusion, the separation techniques of proteins are based on properties such as solubility, charge, and size. Protein viscosity is not commonly used as a property for protein separation.

Which of the following methods can be used to determine the molecular weight of a given polypeptide.a)Gel filtration chromatographyb)SDS-PAGEc)MALDI-TOF mass spectroscopyd)ChIP assayCorrect answer is option 'A,B,C'. Can you explain this answer?
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